CDS

Accession Number TCMCG016C07976
gbkey CDS
Protein Id OMO88041.1
Location complement(39249..41000)
Organism Corchorus capsularis
locus_tag CCACVL1_08574

Protein

Length 583aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01009095.1
Definition Pseudouridine synthase/archaeosine transglycosylase [Corchorus capsularis]
Locus_tag CCACVL1_08574

EGGNOG-MAPPER Annotation

COG_category J
Description H ACA ribonucleoprotein complex subunit
KEGG_TC -
KEGG_Module M00425        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
ko03032        [VIEW IN KEGG]
KEGG_ko ko:K11131        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03008        [VIEW IN KEGG]
map03008        [VIEW IN KEGG]
GOs GO:0000154        [VIEW IN EMBL-EBI]
GO:0000495        [VIEW IN EMBL-EBI]
GO:0001522        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005732        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0005911        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009451        [VIEW IN EMBL-EBI]
GO:0009506        [VIEW IN EMBL-EBI]
GO:0009982        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0016073        [VIEW IN EMBL-EBI]
GO:0016074        [VIEW IN EMBL-EBI]
GO:0016556        [VIEW IN EMBL-EBI]
GO:0016853        [VIEW IN EMBL-EBI]
GO:0016866        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0030054        [VIEW IN EMBL-EBI]
GO:0031118        [VIEW IN EMBL-EBI]
GO:0031120        [VIEW IN EMBL-EBI]
GO:0031123        [VIEW IN EMBL-EBI]
GO:0031126        [VIEW IN EMBL-EBI]
GO:0031429        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033979        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0034964        [VIEW IN EMBL-EBI]
GO:0040031        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0043144        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043628        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044452        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0055044        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0072588        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990481        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCTGAGGTTGAGCTCTCTCGTTCCGAAAAGAAAAAGAGCAAGAAAAAAACCATGGCGGATTCCGAACCCAAAGAAGCCGACCAGGATTTCATGATCAAACCCCAGAGCACAGTCCCTTCACTCGACACTTCCCAGTGGCCTATCCTTCTGAAGAACTACGAGCGGCTGAACGTGCGAACCGGCCACTATACTCCCCTCCCTTGCGGTTTCTCTCCTCTGAAGCGGCCCCTTCCTGAATACATCAGGTACGGTATTATGAACCTTGATAAGCCCTCTAATCCTTCTTCCCATGAGGTTGTTGCTTGGATTAAGCGTATTTTACGCGTAGAAAAGACTGGTCATAGTGGAACTTTGGACCCCAAAGTCACTGGGAATCTCATCGTGTGTATTGATAGAGCCACCCGGCTTGTTAAGTCGCAACAGGGTGCGGGCAAAGAGTATGTTTGCGTTGCCCGCCTGCATTCCAAAGTGCCTGATGTTGCTAAGGTTGCTAGGGCTCTTGAAACTTTGACTGGAGCTGTTTTCCAGAAGCCCCCTCTGATTTCAGCTGTCAAAAGACAGCTTAGGATTAGGACTATTTATGAAAGTAAGCTTCTTGAGTATGATGCAGATAGGCATTTGGTTGTGTTTTGGATTTCTTGTGAGGCTGGTACTTATGTCAGGACTATGTGTGTTCATTTGGGGTTGATTCTTGGGGTTGGTGGGCATATGCAGGAACTTAGGAGGGTCCGGTCTGGGATTTTGGGTGAGAAAGATAATATGGTTACAATGCATGATGTTATGGATGCTCAATGGGTTTATGATAATTTTAGAGATGAGAGTTATTTGAGGAGGGTGATTATGCCACTTGAAGTTATATTGACTAGTTATAAGAGGTTGGTTGTCAAGGATTCTGCTGTCAATGCTATTTGTTATGGGGCTAAGTTGATGATTCCCGGTTTGTTGAGGTTTGAGAATGATATTGAGGTTGGGGAGGAAGTTGTATTGATGACCACTAAAGGAGAGGCAATTGCATTGGGAATTGCTGAAATGACCACTGCAGTGATGGCTACTTGTGATCATGGTATTGTGGCAAAGATTAAGAGAGTGGTTATGGATAGGGATACTTATCCAAGGAAGTGGGGTTTGGGACCAAATGCCTCAATGAAAAAGAAATTGATTGCAGAAGGCAAATTGGATAAGCATGGAAAGCCAAATGAAAATACTCCTAAAGAGTGGATGAGAAATGTTGTGTTGCCAACTGGTGGGGATGCTATGGTTGCAAGCCTTGCGGCTTCTACTCAACTGGATGCAAAGAATGGTGAGACAGCTGCTGTAGAGAAGGAGATTATAGATGTGGAGAAGGTAAAGGAAAAAAAGAAGAAGAAGGACAAAAATGAGGAAGATGGGGAGGGGCGTAAGCGCAAACTGGATGAAGATAGCCCTGTTCCAGTTGTCTCTAAGAAAGCTAAAGTTGAAGAAGCTGAAGCCGAAGTAGAAGGTGACAAGAAAGAGAAAAAGAAGAAGAAGAAGGATAAAGAGAATGATGATGCCGAAGCTGGAGAGAAGACTGAGGAGAAGAAGAAAAAGAAGAACAAAGATAAGGTTGAAGCTGGTTCACCAGATACAGAGAAATCTGAGAAGAAAAAGAAGAAGAGCAAAGACAGTGAGGAGGCTGCTGCTGTTGTTAATGGTGCAAATGATGCAGAGGCTGATAAAAGTGAAAAGAAGAAAAAGAAGAAAAAAAGCAAAGATGCGGTGGAGGAGTAG
Protein:  
MSEVELSRSEKKKSKKKTMADSEPKEADQDFMIKPQSTVPSLDTSQWPILLKNYERLNVRTGHYTPLPCGFSPLKRPLPEYIRYGIMNLDKPSNPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCVARLHSKVPDVAKVARALETLTGAVFQKPPLISAVKRQLRIRTIYESKLLEYDADRHLVVFWISCEAGTYVRTMCVHLGLILGVGGHMQELRRVRSGILGEKDNMVTMHDVMDAQWVYDNFRDESYLRRVIMPLEVILTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDIEVGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGIVAKIKRVVMDRDTYPRKWGLGPNASMKKKLIAEGKLDKHGKPNENTPKEWMRNVVLPTGGDAMVASLAASTQLDAKNGETAAVEKEIIDVEKVKEKKKKKDKNEEDGEGRKRKLDEDSPVPVVSKKAKVEEAEAEVEGDKKEKKKKKKDKENDDAEAGEKTEEKKKKKNKDKVEAGSPDTEKSEKKKKKSKDSEEAAAVVNGANDAEADKSEKKKKKKKSKDAVEE